CSSQ: a ChIP-seq signal quantifier pipeline

CSSQ: a ChIP-seq signal quantifier pipeline

Chromatin immunoprecipitation followed by sequencing (ChIP-seq) has revolutionized the studies of epigenomes and the massive increase in ChIP-seq datasets calls for robust and user-friendly computational tools for quantitative ChIP-seq. Quantitative ChIP-seq comparisons have been challenging due to...

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Bibliographic Details
Main Authors: Ashwath Kumar, Michael Y. Hu, Yajun Mei, Yuhong Fan
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-05-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
ChIP-seq signal quantifier (CSSQ)
ChIP-seq
differential binding
epigenetic marks
statistical analysis
k-means clustering
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2023.1167111/full

Internet

https://www.frontiersin.org/articles/10.3389/fcell.2023.1167111/full

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