SafeMut: UMI-aware variant simulator incorporating allele-fraction overdispersion in read editing

Next-generation sequencing (NGS) has been widely used for calling biological variants. The gold-standard methodology for accessing the ability of a computational method to call a specific variant is to perform NGS wet-lab experiments on samples known to harbor this variant. Nevertheless, wet-lab exp...

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Bibliographic Details
Main Authors: Xiaofei Zhao, Jingyu Guo, Sizhen Wang
Format: Article
Language:English
Published: Elsevier 2023-01-01
Series:Informatics in Medicine Unlocked
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2352914823001533