Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Abstract The spatial organization of molecules in a cell is essential for their functions. While current methods focus on discerning tissue architecture, cell–cell interactions, and spatial expression patterns, they are limited to the multicellular scale. We present Bento, a Python toolkit that take...

Full description

Bibliographic Details
Main Authors: Clarence K. Mah, Noorsher Ahmed, Nicole A. Lopez, Dylan C. Lam, Avery Pong, Alexander Monell, Colin Kern, Yuanyuan Han, Gino Prasad, Anthony J. Cesnik, Emma Lundberg, Quan Zhu, Hannah Carter, Gene W. Yeo
Format: Article
Language:English
Published: BMC 2024-04-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-024-03217-7

Internet

https://doi.org/10.1186/s13059-024-03217-7

Similar Items