Relative binding free energy calculations with transformato: A molecular dynamics engine-independent tool

We present the software package transformato for the setup of large-scale relative binding free energy calculations. Transformato is written in Python as an open source project (https://github.com/wiederm/transformato); in contrast to comparable tools, it is not closely tied to a particular molecula...

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Bibliographic Details
Main Authors: Johannes Karwounopoulos, Marcus Wieder, Stefan Boresch
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-09-01
Series:Frontiers in Molecular Biosciences
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmolb.2022.954638/full