Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding

Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding

Comprehensive annotating of cell types in spatially resolved transcriptomics to understand biological processes at the single cell level remains challenging. Here the authors introduce Spatial-ID, a supervision-based cell typing method, that combines the existing knowledge of reference single-cell R...

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Bibliographic Details
Main Authors: Rongbo Shen, Lin Liu, Zihan Wu, Ying Zhang, Zhiyuan Yuan, Junfu Guo, Fan Yang, Chao Zhang, Bichao Chen, Wanwan Feng, Chao Liu, Jing Guo, Guozhen Fan, Yong Zhang, Yuxiang Li, Xun Xu, Jianhua Yao
Format: Article
Language:English
Published: Nature Portfolio 2022-12-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-022-35288-0

Internet

https://doi.org/10.1038/s41467-022-35288-0

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