Maast: genotyping thousands of microbial strains efficiently
Abstract Existing single nucleotide polymorphism (SNP) genotyping algorithms do not scale for species with thousands of sequenced strains, nor do they account for conspecific redundancy. Here we present a bioinformatics tool, Maast, which empowers population genetic meta-analysis of microbes at an u...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
BMC
2023-08-01
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| Series: | Genome Biology |
| Online Access: | https://doi.org/10.1186/s13059-023-03030-8 |