R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1

Maintenance of genome stability is crucial for cell survival and relies on accurate DNA replication. However, replication fork progression is under constant attack from different exogenous and endogenous factors that can give rise to replication stress, a source of genomic instability and a notable...

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Main Authors: Veronica Marabitti, Pasquale Valenzisi, Giorgia Lillo, Eva Malacaria, Valentina Palermo, Pietro Pichierri, Annapaola Franchitto
Format: Article
Language:English
Published: MDPI AG 2022-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/23/3/1547
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author Veronica Marabitti
Pasquale Valenzisi
Giorgia Lillo
Eva Malacaria
Valentina Palermo
Pietro Pichierri
Annapaola Franchitto
author_facet Veronica Marabitti
Pasquale Valenzisi
Giorgia Lillo
Eva Malacaria
Valentina Palermo
Pietro Pichierri
Annapaola Franchitto
author_sort Veronica Marabitti
collection DOAJ
description Maintenance of genome stability is crucial for cell survival and relies on accurate DNA replication. However, replication fork progression is under constant attack from different exogenous and endogenous factors that can give rise to replication stress, a source of genomic instability and a notable hallmark of pre-cancerous and cancerous cells. Notably, one of the major natural threats for DNA replication is transcription. Encounters or conflicts between replication and transcription are unavoidable, as they compete for the same DNA template, so that collisions occur quite frequently. The main harmful transcription-associated structures are R-loops. These are DNA structures consisting of a DNA–RNA hybrid and a displaced single-stranded DNA, which play important physiological roles. However, if their homeostasis is altered, they become a potent source of replication stress and genome instability giving rise to several human diseases, including cancer. To combat the deleterious consequences of pathological R-loop persistence, cells have evolved multiple mechanisms, and an ever growing number of replication fork protection factors have been implicated in preventing/removing these harmful structures; however, many others are perhaps still unknown. In this review, we report the current knowledge on how aberrant R-loops affect genome integrity and how they are handled, and we discuss our recent findings on the role played by two fork protection factors, the Werner syndrome protein (WRN) and the Werner helicase-interacting protein 1 (WRNIP1) in response to R-loop-induced genome instability.
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spelling doaj.art-3cce765f2af74f9690d7512038949d482023-11-23T16:42:15ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672022-01-01233154710.3390/ijms23031547R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1Veronica Marabitti0Pasquale Valenzisi1Giorgia Lillo2Eva Malacaria3Valentina Palermo4Pietro Pichierri5Annapaola Franchitto6Department of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyDepartment of Environment and Health, Section of Mechanisms Biomarkers and Models, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161 Rome, ItalyMaintenance of genome stability is crucial for cell survival and relies on accurate DNA replication. However, replication fork progression is under constant attack from different exogenous and endogenous factors that can give rise to replication stress, a source of genomic instability and a notable hallmark of pre-cancerous and cancerous cells. Notably, one of the major natural threats for DNA replication is transcription. Encounters or conflicts between replication and transcription are unavoidable, as they compete for the same DNA template, so that collisions occur quite frequently. The main harmful transcription-associated structures are R-loops. These are DNA structures consisting of a DNA–RNA hybrid and a displaced single-stranded DNA, which play important physiological roles. However, if their homeostasis is altered, they become a potent source of replication stress and genome instability giving rise to several human diseases, including cancer. To combat the deleterious consequences of pathological R-loop persistence, cells have evolved multiple mechanisms, and an ever growing number of replication fork protection factors have been implicated in preventing/removing these harmful structures; however, many others are perhaps still unknown. In this review, we report the current knowledge on how aberrant R-loops affect genome integrity and how they are handled, and we discuss our recent findings on the role played by two fork protection factors, the Werner syndrome protein (WRN) and the Werner helicase-interacting protein 1 (WRNIP1) in response to R-loop-induced genome instability.https://www.mdpi.com/1422-0067/23/3/1547genomic instabilityreplication stressDNA repairRecQ helicasesR-loops
spellingShingle Veronica Marabitti
Pasquale Valenzisi
Giorgia Lillo
Eva Malacaria
Valentina Palermo
Pietro Pichierri
Annapaola Franchitto
R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
International Journal of Molecular Sciences
genomic instability
replication stress
DNA repair
RecQ helicases
R-loops
title R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
title_full R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
title_fullStr R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
title_full_unstemmed R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
title_short R-Loop-Associated Genomic Instability and Implication of WRN and WRNIP1
title_sort r loop associated genomic instability and implication of wrn and wrnip1
topic genomic instability
replication stress
DNA repair
RecQ helicases
R-loops
url https://www.mdpi.com/1422-0067/23/3/1547
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