Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification

Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification

Abstract Background Plant LTR-retrotransposons are classified into two superfamilies, Ty1/copia and Ty3/gypsy. They are further divided into an enormous number of families which are, due to the high diversity of their nucleotide sequences, usually specific to a single or a group of closely related s...

Full description

Bibliographic Details
Main Authors: Pavel Neumann, Petr Novák, Nina Hoštáková, Jiří Macas
Format: Article
Language:English
Published: BMC 2019-01-01
Series:Mobile DNA
Subjects:
LTR-retrotransposons
Transposable elements
Polyprotein domains
Primer binding site
RepeatExplorer
Online Access:http://link.springer.com/article/10.1186/s13100-018-0144-1

Internet

http://link.springer.com/article/10.1186/s13100-018-0144-1

Similar Items