Generation of a pooled shRNA library for functional genomics screens

Summary: Here, we detail a protocol for the generation of pooled short hairpin RNA (shRNA) libraries. We cover the design of optimized miR-E backbone shRNAs, cloning into a Tet-on vector system, and transformation of competent bacteria. We also describe library quality check by next-generation seque...

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Bibliographic Details
Main Authors: Dimitrios Papadopoulos, Carsten Patrick Ade, Martin Eilers
Format: Article
Language:English
Published: Elsevier 2022-03-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166722000636