Comparison of error correction algorithms for Ion Torrent PGM data: application to hepatitis B virus

Abstract Ion Torrent Personal Genome Machine (PGM) technology is a mid-length read, low-cost and high-speed next-generation sequencing platform with a relatively high insertion and deletion (indel) error rate. A full systematic assessment of the effectiveness of various error correction algorithms i...

Full description

Bibliographic Details
Main Authors: Liting Song, Wenxun Huang, Juan Kang, Yuan Huang, Hong Ren, Keyue Ding
Format: Article
Language:English
Published: Nature Portfolio 2017-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-017-08139-y