Using earth mover’s distance for viral outbreak investigations

Abstract Background RNA viruses mutate at extremely high rates, forming an intra-host viral population of closely related variants, which allows them to evade the host’s immune system and makes them particularly dangerous. Viral outbreaks pose a significant threat for public health, and, in order to...

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Bibliographic Details
Main Authors: Andrew Melnyk, Sergey Knyazev, Fredrik Vannberg, Leonid Bunimovich, Pavel Skums, Alex Zelikovsky
Format: Article
Language:English
Published: BMC 2020-12-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-020-06982-4