Deep learning model of somatic hypermutation reveals importance of sequence context beyond hotspot targeting

Summary: B cells undergo somatic hypermutation (SHM) of the Immunoglobulin (Ig) variable region to generate high-affinity antibodies. SHM relies on the activity of activation-induced deaminase (AID), which mutates C>U preferentially targeting WRC (W=A/T, R=A/G) hotspots. Downstream mutations at W...

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Bibliographic Details
Main Authors: Catherine Tang, Artem Krantsevich, Thomas MacCarthy
Format: Article
Language:English
Published: Elsevier 2022-01-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004221016382