Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease

Trinucleotide repeat disorders comprise ~20 severe, inherited, human neuromuscular and neurodegenerative disorders, which result from an abnormal expansion of repetitive sequences in the DNA. The most common of these, Huntington’s disease (HD), results from expansion of the CAG repeat region in exon...

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Main Authors: Laura Gantley, Brett W. Stringer, Vanessa M. Conn, Youichirou Ootsuka, Duncan Holds, Mark Slee, Kamelya Aliakbari, Kirsty Kirk, Rebecca J. Ormsby, Stuart T. Webb, Adrienne Hanson, He Lin, Luke A. Selth, Simon J. Conn
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Language:English
Published: MDPI AG 2023-05-01
Series:Cells
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Online Access:https://www.mdpi.com/2073-4409/12/9/1337
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author Laura Gantley
Brett W. Stringer
Vanessa M. Conn
Youichirou Ootsuka
Duncan Holds
Mark Slee
Kamelya Aliakbari
Kirsty Kirk
Rebecca J. Ormsby
Stuart T. Webb
Adrienne Hanson
He Lin
Luke A. Selth
Simon J. Conn
author_facet Laura Gantley
Brett W. Stringer
Vanessa M. Conn
Youichirou Ootsuka
Duncan Holds
Mark Slee
Kamelya Aliakbari
Kirsty Kirk
Rebecca J. Ormsby
Stuart T. Webb
Adrienne Hanson
He Lin
Luke A. Selth
Simon J. Conn
author_sort Laura Gantley
collection DOAJ
description Trinucleotide repeat disorders comprise ~20 severe, inherited, human neuromuscular and neurodegenerative disorders, which result from an abnormal expansion of repetitive sequences in the DNA. The most common of these, Huntington’s disease (HD), results from expansion of the CAG repeat region in exon 1 of the <i>HTT</i> gene via an unknown mechanism. Since non-coding RNAs have been implicated in the initiation and progression of many diseases, herein we focused on a circular RNA (circRNA) molecule arising from non-canonical splicing (backsplicing) of <i>HTT</i> pre-mRNA. The most abundant circRNA from <i>HTT</i>, <i>circHTT(2-6)</i>, was found to be more highly expressed in the frontal cortex of HD patients, compared with healthy controls, and positively correlated with CAG repeat tract length. Furthermore, the mouse orthologue (mmu_<i>circHTT(2-6)</i>) was found to be enriched within the brain and specifically the striatum, a region enriched for medium spiny neurons that are preferentially lost in HD. Transgenic overexpression of <i>circHTT(2-6)</i> in two human cell lines—SH-SY5Y and HEK293—reduced cell proliferation and nuclear size without affecting cell cycle progression or cellular size, or altering the CAG repeat region length within <i>HTT</i>. <i>CircHTT(2-6)</i> overexpression did not alter total HTT protein levels, but reduced its nuclear localisation. As these phenotypic and genotypic changes resemble those observed in HD patients, our results suggest that <i>circHTT(2-6)</i> may play a functional role in the pathophysiology of this disease.
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spelling doaj.art-44403ff8fe62462eb9bb5985f09982662023-11-17T22:44:32ZengMDPI AGCells2073-44092023-05-01129133710.3390/cells12091337Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s DiseaseLaura Gantley0Brett W. Stringer1Vanessa M. Conn2Youichirou Ootsuka3Duncan Holds4Mark Slee5Kamelya Aliakbari6Kirsty Kirk7Rebecca J. Ormsby8Stuart T. Webb9Adrienne Hanson10He Lin11Luke A. Selth12Simon J. Conn13Flinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaDepartment of Genetics and Molecular Pathology, SA Pathology, Flinders Medical Centre, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaFlinders Health and Medical Research Institute (FHMRI), College of Medicine and Public Health, Flinders University, Bedford Park, SA 5042, AustraliaTrinucleotide repeat disorders comprise ~20 severe, inherited, human neuromuscular and neurodegenerative disorders, which result from an abnormal expansion of repetitive sequences in the DNA. The most common of these, Huntington’s disease (HD), results from expansion of the CAG repeat region in exon 1 of the <i>HTT</i> gene via an unknown mechanism. Since non-coding RNAs have been implicated in the initiation and progression of many diseases, herein we focused on a circular RNA (circRNA) molecule arising from non-canonical splicing (backsplicing) of <i>HTT</i> pre-mRNA. The most abundant circRNA from <i>HTT</i>, <i>circHTT(2-6)</i>, was found to be more highly expressed in the frontal cortex of HD patients, compared with healthy controls, and positively correlated with CAG repeat tract length. Furthermore, the mouse orthologue (mmu_<i>circHTT(2-6)</i>) was found to be enriched within the brain and specifically the striatum, a region enriched for medium spiny neurons that are preferentially lost in HD. Transgenic overexpression of <i>circHTT(2-6)</i> in two human cell lines—SH-SY5Y and HEK293—reduced cell proliferation and nuclear size without affecting cell cycle progression or cellular size, or altering the CAG repeat region length within <i>HTT</i>. <i>CircHTT(2-6)</i> overexpression did not alter total HTT protein levels, but reduced its nuclear localisation. As these phenotypic and genotypic changes resemble those observed in HD patients, our results suggest that <i>circHTT(2-6)</i> may play a functional role in the pathophysiology of this disease.https://www.mdpi.com/2073-4409/12/9/1337circular RNAHuntington’s disease<i>Huntingtin</i><i>HTT</i>triplet repeat disorders
spellingShingle Laura Gantley
Brett W. Stringer
Vanessa M. Conn
Youichirou Ootsuka
Duncan Holds
Mark Slee
Kamelya Aliakbari
Kirsty Kirk
Rebecca J. Ormsby
Stuart T. Webb
Adrienne Hanson
He Lin
Luke A. Selth
Simon J. Conn
Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
Cells
circular RNA
Huntington’s disease
<i>Huntingtin</i>
<i>HTT</i>
triplet repeat disorders
title Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
title_full Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
title_fullStr Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
title_full_unstemmed Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
title_short Functional Characterisation of the Circular RNA, <i>circHTT(2-6)</i>, in Huntington’s Disease
title_sort functional characterisation of the circular rna i circhtt 2 6 i in huntington s disease
topic circular RNA
Huntington’s disease
<i>Huntingtin</i>
<i>HTT</i>
triplet repeat disorders
url https://www.mdpi.com/2073-4409/12/9/1337
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