A method for chromatin domain partitioning based on hypergraph clustering
For many years, multi-scale models of chromatin domains, such as A/B compartments, sub-compartments, topologically associated domains (TADs), sub-TADs, and loops have been popular. However, existing methods can only identify structures at a single scale and cannot partition multi-scale structures. I...
Main Authors: | Haiyan Gong, Sichen Zhang, Xiaotong Zhang, Yang Chen |
---|---|
Format: | Article |
Language: | English |
Published: |
Elsevier
2024-12-01
|
Series: | Computational and Structural Biotechnology Journal |
Subjects: | |
Online Access: | http://www.sciencedirect.com/science/article/pii/S2001037024000916 |
Similar Items
-
Subdivision of hypergraphs and their colorings
by: Moharram N. Iradmusa
Published: (2020-03-01) -
EpiMCI: Predicting Multi-Way Chromatin Interactions from Epigenomic Signals
by: Jinsheng Xu, et al.
Published: (2023-09-01) -
ON THE NORMALITY OF t-CAYLEY HYPERGRAPHS OF ABELIAN GROUPS
by: R. Bayat, et al.
Published: (2019-09-01) -
Vertex partition of hypergraphs and maximum degenerate subhypergraphs
by: Thomas Schweser, et al.
Published: (2021-04-01) -
Hypergraph seminar /
by: Working Seminar on Hypergraph (1st : 1972 : Ohio), et al.
Published: (1974)