Efficient gene orthology inference via large-scale rearrangements

Efficient gene orthology inference via large-scale rearrangements

Abstract Background Recently we developed a gene orthology inference tool based on genome rearrangements (Journal of Bioinformatics and Computational Biology 19:6, 2021). Given a set of genomes our method first computes all pairwise gene similarities. Then it runs pairwise ILP comparisons to compute...

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Bibliographic Details
Main Authors: Diego P. Rubert, Marília D. V. Braga
Format: Article
Language:English
Published: BMC 2023-09-01
Series:Algorithms for Molecular Biology
Subjects:
Comparative genomics
Double-cut-and-join
Indels
Gene orthology
Online Access:https://doi.org/10.1186/s13015-023-00238-y

Internet

https://doi.org/10.1186/s13015-023-00238-y

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