Software pipelines for RNA-Seq, ChIP-Seq and germline variant calling analyses in common workflow language (CWL)

Background: Automating data analysis pipelines is a key requirement to ensure reproducibility of results, especially when dealing with large volumes of data. Here we assembled automated pipelines for the analysis of High-throughput Sequencing (HTS) data originating from RNA-Seq, ChIP-Seq and Germlin...

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Bibliographic Details
Main Authors: Konstantinos A. Kyritsis, Nikolaos Pechlivanis, Fotis Psomopoulos
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-11-01
Series:Frontiers in Bioinformatics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fbinf.2023.1275593/full