Brain Registration and Evaluation for Zebrafish (BREEZE)-mapping: A pipeline for whole-brain structural and activity analyses

Brain Registration and Evaluation for Zebrafish (BREEZE)-mapping: A pipeline for whole-brain structural and activity analyses

Summary: Here, we present Brain Registration and Evaluation for Zebrafish (BREEZE)-mapping, a user-friendly pipeline for the registration and analysis of whole-brain images in larval zebrafish. We describe steps for pre-processing, registration, quantification, and visualization of whole-brain pheno...

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Bibliographic Details
Main Authors: David S. Jin, Uma Neelakantan, Cheryl M. Lacadie, Tianying Chen, Brendan Rooney, Yunqing Liu, Weimiao Wu, Zuoheng Wang, Xenophon Papademetris, Ellen J. Hoffman
Format: Article
Language:English
Published: Elsevier 2023-12-01
Series:STAR Protocols
Subjects:
Genetics
Microscopy
Model Organisms
Neuroscience
Computer Sciences
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166723006147

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http://www.sciencedirect.com/science/article/pii/S2666166723006147

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