Correlations from structure and phylogeny combine constructively in the inference of protein partners from sequences.

Inferring protein-protein interactions from sequences is an important task in computational biology. Recent methods based on Direct Coupling Analysis (DCA) or Mutual Information (MI) allow to find interaction partners among paralogs of two protein families. Does successful inference mainly rely on c...

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Bibliographic Details
Main Authors: Andonis Gerardos, Nicola Dietler, Anne-Florence Bitbol
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-05-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1010147