MonoPhy: a simple R package to find and visualize monophyly issues

Background. The monophyly of taxa is an important attribute of a phylogenetic tree. A lack of it may hint at shortcomings of either the tree or the current taxonomy, or can indicate cases of incomplete lineage sorting or horizontal gene transfer. Whichever is the reason, a lack of monophyly can misg...

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Bibliographic Details
Main Authors: Orlando Schwery, Brian C. O’Meara
Format: Article
Language:English
Published: PeerJ Inc. 2016-03-01
Series:PeerJ Computer Science
Subjects:
Online Access:https://peerj.com/articles/cs-56.pdf