Structural basis of dynamic P5CS filaments

The bifunctional enzyme Δ1-pyrroline-5-carboxylate synthase (P5CS) is vital to the synthesis of proline and ornithine, playing an essential role in human health and agriculture. Pathogenic mutations in the P5CS gene (ALDH18A1) lead to neurocutaneous syndrome and skin relaxation connective tissue dis...

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Main Authors: Jiale Zhong, Chen-Jun Guo, Xian Zhou, Chia-Chun Chang, Boqi Yin, Tianyi Zhang, Huan-Huan Hu, Guang-Ming Lu, Ji-Long Liu
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2022-03-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/76107
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author Jiale Zhong
Chen-Jun Guo
Xian Zhou
Chia-Chun Chang
Boqi Yin
Tianyi Zhang
Huan-Huan Hu
Guang-Ming Lu
Ji-Long Liu
author_facet Jiale Zhong
Chen-Jun Guo
Xian Zhou
Chia-Chun Chang
Boqi Yin
Tianyi Zhang
Huan-Huan Hu
Guang-Ming Lu
Ji-Long Liu
author_sort Jiale Zhong
collection DOAJ
description The bifunctional enzyme Δ1-pyrroline-5-carboxylate synthase (P5CS) is vital to the synthesis of proline and ornithine, playing an essential role in human health and agriculture. Pathogenic mutations in the P5CS gene (ALDH18A1) lead to neurocutaneous syndrome and skin relaxation connective tissue disease in humans, and P5CS deficiency seriously damages the ability to resist adversity in plants. We have recently found that P5CS forms cytoophidia in vivo and filaments in vitro. However, it is difficult to appreciate the function of P5CS filamentation without precise structures. Using cryo-electron microscopy, here we solve the structures of Drosophila full-length P5CS in three states at resolution from 3.1 to 4.3 Å. We observe distinct ligand-binding states and conformational changes for the GK and GPR domains, respectively. Divergent helical filaments are assembled by P5CS tetramers and stabilized by multiple interfaces. Point mutations disturbing those interfaces prevent P5CS filamentation and greatly reduce the enzymatic activity. Our findings reveal that filamentation is crucial for the coordination between the GK and GPR domains, providing a structural basis for the catalytic function of P5CS filaments.
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spelling doaj.art-4919bfad814545dfb6cfce7ab23adc0d2022-12-22T03:33:56ZengeLife Sciences Publications LtdeLife2050-084X2022-03-011110.7554/eLife.76107Structural basis of dynamic P5CS filamentsJiale Zhong0https://orcid.org/0000-0001-5873-0450Chen-Jun Guo1https://orcid.org/0000-0001-5342-4761Xian Zhou2https://orcid.org/0000-0002-0000-2415Chia-Chun Chang3https://orcid.org/0000-0001-7942-6300Boqi Yin4https://orcid.org/0000-0003-3974-9820Tianyi Zhang5https://orcid.org/0000-0002-4632-6298Huan-Huan Hu6https://orcid.org/0000-0002-5997-530XGuang-Ming Lu7https://orcid.org/0000-0002-6607-2264Ji-Long Liu8https://orcid.org/0000-0002-4834-8554School of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaSchool of Life Science and Technology, ShanghaiTech University, Shanghai, ChinaThe bifunctional enzyme Δ1-pyrroline-5-carboxylate synthase (P5CS) is vital to the synthesis of proline and ornithine, playing an essential role in human health and agriculture. Pathogenic mutations in the P5CS gene (ALDH18A1) lead to neurocutaneous syndrome and skin relaxation connective tissue disease in humans, and P5CS deficiency seriously damages the ability to resist adversity in plants. We have recently found that P5CS forms cytoophidia in vivo and filaments in vitro. However, it is difficult to appreciate the function of P5CS filamentation without precise structures. Using cryo-electron microscopy, here we solve the structures of Drosophila full-length P5CS in three states at resolution from 3.1 to 4.3 Å. We observe distinct ligand-binding states and conformational changes for the GK and GPR domains, respectively. Divergent helical filaments are assembled by P5CS tetramers and stabilized by multiple interfaces. Point mutations disturbing those interfaces prevent P5CS filamentation and greatly reduce the enzymatic activity. Our findings reveal that filamentation is crucial for the coordination between the GK and GPR domains, providing a structural basis for the catalytic function of P5CS filaments.https://elifesciences.org/articles/76107P5CScytoophidiumproline synthesisDrosophilaCryo-EMmetabolic enzyme
spellingShingle Jiale Zhong
Chen-Jun Guo
Xian Zhou
Chia-Chun Chang
Boqi Yin
Tianyi Zhang
Huan-Huan Hu
Guang-Ming Lu
Ji-Long Liu
Structural basis of dynamic P5CS filaments
eLife
P5CS
cytoophidium
proline synthesis
Drosophila
Cryo-EM
metabolic enzyme
title Structural basis of dynamic P5CS filaments
title_full Structural basis of dynamic P5CS filaments
title_fullStr Structural basis of dynamic P5CS filaments
title_full_unstemmed Structural basis of dynamic P5CS filaments
title_short Structural basis of dynamic P5CS filaments
title_sort structural basis of dynamic p5cs filaments
topic P5CS
cytoophidium
proline synthesis
Drosophila
Cryo-EM
metabolic enzyme
url https://elifesciences.org/articles/76107
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