Disentangling the genetic basis of rhizosphere microbiome assembly in tomato
Genetics factors involved in rhizosphere microbiomes assembly remain largely elusive. Here, the authors integrate microbiomics and quantitative plant genetics to reveal genetic loci associated with specific microbes and rhizobacterial traits underlying microbiome assembly in tomato.
| Autores principales: | , , , , , , , , , , , , , , , , , |
|---|---|
| Formato: | Artículo |
| Lenguaje: | English |
| Publicado: |
Nature Portfolio
2022-06-01
|
| Colección: | Nature Communications |
| Acceso en línea: | https://doi.org/10.1038/s41467-022-30849-9 |
| _version_ | 1828325267450363904 |
|---|---|
| author | Ben O. Oyserman Stalin Sarango Flores Thom Griffioen Xinya Pan Elmar van der Wijk Lotte Pronk Wouter Lokhorst Azkia Nurfikari Joseph N. Paulson Mercedeh Movassagh Nejc Stopnisek Anne Kupczok Viviane Cordovez Víctor J. Carrión Wilco Ligterink Basten L. Snoek Marnix H. Medema Jos M. Raaijmakers |
| author_facet | Ben O. Oyserman Stalin Sarango Flores Thom Griffioen Xinya Pan Elmar van der Wijk Lotte Pronk Wouter Lokhorst Azkia Nurfikari Joseph N. Paulson Mercedeh Movassagh Nejc Stopnisek Anne Kupczok Viviane Cordovez Víctor J. Carrión Wilco Ligterink Basten L. Snoek Marnix H. Medema Jos M. Raaijmakers |
| author_sort | Ben O. Oyserman |
| collection | DOAJ |
| description | Genetics factors involved in rhizosphere microbiomes assembly remain largely elusive. Here, the authors integrate microbiomics and quantitative plant genetics to reveal genetic loci associated with specific microbes and rhizobacterial traits underlying microbiome assembly in tomato. |
| first_indexed | 2024-04-13T19:19:57Z |
| format | Article |
| id | doaj.art-499c7c7c3e5340bf83c23e2b7e9bf1f6 |
| institution | Directory Open Access Journal |
| issn | 2041-1723 |
| language | English |
| last_indexed | 2024-04-13T19:19:57Z |
| publishDate | 2022-06-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Nature Communications |
| spelling | doaj.art-499c7c7c3e5340bf83c23e2b7e9bf1f62022-12-22T02:33:34ZengNature PortfolioNature Communications2041-17232022-06-0113111610.1038/s41467-022-30849-9Disentangling the genetic basis of rhizosphere microbiome assembly in tomatoBen O. Oyserman0Stalin Sarango Flores1Thom Griffioen2Xinya Pan3Elmar van der Wijk4Lotte Pronk5Wouter Lokhorst6Azkia Nurfikari7Joseph N. Paulson8Mercedeh Movassagh9Nejc Stopnisek10Anne Kupczok11Viviane Cordovez12Víctor J. Carrión13Wilco Ligterink14Basten L. Snoek15Marnix H. Medema16Jos M. Raaijmakers17Department of Microbial Ecology, Netherlands Institute of EcologyDepartment of Microbial Ecology, Netherlands Institute of EcologyDepartment of Microbial Ecology, Netherlands Institute of EcologyDepartment of Microbial Ecology, Netherlands Institute of EcologyBioinformatics Group, Wageningen UniversityBioinformatics Group, Wageningen UniversityDepartment of Microbial Ecology, Netherlands Institute of EcologyDepartment of Microbial Ecology, Netherlands Institute of EcologyDepartment of Data Sciences, Genentech, Inc. South San FranciscoDepartment of Biostatistics, Harvard T.H. Chan School of Public HealthDepartment of Microbial Ecology, Netherlands Institute of EcologyBioinformatics Group, Wageningen UniversityDepartment of Microbial Ecology, Netherlands Institute of EcologyDepartment of Microbial Ecology, Netherlands Institute of EcologyWageningen Seed Lab, Laboratory of Plant Physiology, Wageningen UniversityTheoretical Biology and Bioinformatics, Utrecht UniversityBioinformatics Group, Wageningen UniversityDepartment of Microbial Ecology, Netherlands Institute of EcologyGenetics factors involved in rhizosphere microbiomes assembly remain largely elusive. Here, the authors integrate microbiomics and quantitative plant genetics to reveal genetic loci associated with specific microbes and rhizobacterial traits underlying microbiome assembly in tomato.https://doi.org/10.1038/s41467-022-30849-9 |
| spellingShingle | Ben O. Oyserman Stalin Sarango Flores Thom Griffioen Xinya Pan Elmar van der Wijk Lotte Pronk Wouter Lokhorst Azkia Nurfikari Joseph N. Paulson Mercedeh Movassagh Nejc Stopnisek Anne Kupczok Viviane Cordovez Víctor J. Carrión Wilco Ligterink Basten L. Snoek Marnix H. Medema Jos M. Raaijmakers Disentangling the genetic basis of rhizosphere microbiome assembly in tomato Nature Communications |
| title | Disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| title_full | Disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| title_fullStr | Disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| title_full_unstemmed | Disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| title_short | Disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| title_sort | disentangling the genetic basis of rhizosphere microbiome assembly in tomato |
| url | https://doi.org/10.1038/s41467-022-30849-9 |
| work_keys_str_mv | AT benooyserman disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT stalinsarangoflores disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT thomgriffioen disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT xinyapan disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT elmarvanderwijk disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT lottepronk disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT wouterlokhorst disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT azkianurfikari disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT josephnpaulson disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT mercedehmovassagh disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT nejcstopnisek disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT annekupczok disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT vivianecordovez disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT victorjcarrion disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT wilcoligterink disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT bastenlsnoek disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT marnixhmedema disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato AT josmraaijmakers disentanglingthegeneticbasisofrhizospheremicrobiomeassemblyintomato |