Mora: abundance aware metagenomic read re-assignment for disentangling similar strains

Abstract Background Taxonomic classification of reads obtained by metagenomic sequencing is often a first step for understanding a microbial community, but correctly assigning sequencing reads to the strain or sub-species level has remained a challenging computational problem. Results We introduce M...

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Bibliographic Details
Main Authors: Andrew Zheng, Jim Shaw, Yun William Yu
Format: Article
Language:English
Published: BMC 2024-04-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-024-05768-9