Galba: genome annotation with miniprot and AUGUSTUS

Galba: genome annotation with miniprot and AUGUSTUS

Abstract Background The Earth Biogenome Project has rapidly increased the number of available eukaryotic genomes, but most released genomes continue to lack annotation of protein-coding genes. In addition, no transcriptome data is available for some genomes. Results Various gene annotation tools hav...

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Bibliographic Details
Main Authors: Tomáš Brůna, Heng Li, Joseph Guhlin, Daniel Honsel, Steffen Herbold, Mario Stanke, Natalia Nenasheva, Matthis Ebel, Lars Gabriel, Katharina J. Hoff
Format: Article
Language:English
Published: BMC 2023-08-01
Series:BMC Bioinformatics
Subjects:
Gene prediction
Protein coding gene
Miniprot
AUGUSTUS
Online Access:https://doi.org/10.1186/s12859-023-05449-z

Internet

https://doi.org/10.1186/s12859-023-05449-z

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