A Panel of rSNPs Demonstrating Allelic Asymmetry in Both ChIP-seq and RNA-seq Data and the Search for Their Phenotypic Outcomes through Analysis of DEGs

A Panel of rSNPs Demonstrating Allelic Asymmetry in Both ChIP-seq and RNA-seq Data and the Search for Their Phenotypic Outcomes through Analysis of DEGs

Currently, the detection of the allele asymmetry of gene expression from RNA-seq data or the transcription factor binding from ChIP-seq data is one of the approaches used to identify the functional genetic variants that can affect gene expression (regulatory SNPs or rSNPs). In this study, we searche...

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Bibliographic Details
Main Authors: Elena E. Korbolina, Leonid O. Bryzgalov, Diana Z. Ustrokhanova, Sergey N. Postovalov, Dmitry V. Poverin, Igor S. Damarov, Tatiana I. Merkulova
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:International Journal of Molecular Sciences
Subjects:
allele-specific events
regulatory SNPs
Genotype-Tissue expression
eQTLs
enrichment analysis
protein-protein interaction networks
Online Access:https://www.mdpi.com/1422-0067/22/14/7240

Internet

https://www.mdpi.com/1422-0067/22/14/7240

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