Genome‐scale engineering for systems and synthetic biology

Genome‐modification technologies enable the rational engineering and perturbation of biological systems. Historically, these methods have been limited to gene insertions or mutations at random or at a few pre‐defined locations across the genome. The handful of methods capable of targeted gene editin...

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Main Authors: Kevin M Esvelt, Harris H Wang
Format: Article
Language:English
Published: Springer Nature 2013-01-01
Series:Molecular Systems Biology
Subjects:
Online Access:https://doi.org/10.1038/msb.2012.66
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author Kevin M Esvelt
Harris H Wang
author_facet Kevin M Esvelt
Harris H Wang
author_sort Kevin M Esvelt
collection DOAJ
description Genome‐modification technologies enable the rational engineering and perturbation of biological systems. Historically, these methods have been limited to gene insertions or mutations at random or at a few pre‐defined locations across the genome. The handful of methods capable of targeted gene editing suffered from low efficiencies, significant labor costs, or both. Recent advances have dramatically expanded our ability to engineer cells in a directed and combinatorial manner. Here, we review current technologies and methodologies for genome‐scale engineering, discuss the prospects for extending efficient genome modification to new hosts, and explore the implications of continued advances toward the development of flexibly programmable chasses, novel biochemistries, and safer organismal and ecological engineering.
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spelling doaj.art-4ba1add0595b4f5a8e934ce97704b2342024-03-03T09:32:04ZengSpringer NatureMolecular Systems Biology1744-42922013-01-0191n/an/a10.1038/msb.2012.66Genome‐scale engineering for systems and synthetic biologyKevin M Esvelt0Harris H Wang1Wyss Institute for Biologically Inspired Engineering, Harvard University Boston MA USAWyss Institute for Biologically Inspired Engineering, Harvard University Boston MA USAGenome‐modification technologies enable the rational engineering and perturbation of biological systems. Historically, these methods have been limited to gene insertions or mutations at random or at a few pre‐defined locations across the genome. The handful of methods capable of targeted gene editing suffered from low efficiencies, significant labor costs, or both. Recent advances have dramatically expanded our ability to engineer cells in a directed and combinatorial manner. Here, we review current technologies and methodologies for genome‐scale engineering, discuss the prospects for extending efficient genome modification to new hosts, and explore the implications of continued advances toward the development of flexibly programmable chasses, novel biochemistries, and safer organismal and ecological engineering.https://doi.org/10.1038/msb.2012.66directed evolutiongenome engineeringmetabolic engineeringsynthesissynthetic chassis
spellingShingle Kevin M Esvelt
Harris H Wang
Genome‐scale engineering for systems and synthetic biology
Molecular Systems Biology
directed evolution
genome engineering
metabolic engineering
synthesis
synthetic chassis
title Genome‐scale engineering for systems and synthetic biology
title_full Genome‐scale engineering for systems and synthetic biology
title_fullStr Genome‐scale engineering for systems and synthetic biology
title_full_unstemmed Genome‐scale engineering for systems and synthetic biology
title_short Genome‐scale engineering for systems and synthetic biology
title_sort genome scale engineering for systems and synthetic biology
topic directed evolution
genome engineering
metabolic engineering
synthesis
synthetic chassis
url https://doi.org/10.1038/msb.2012.66
work_keys_str_mv AT kevinmesvelt genomescaleengineeringforsystemsandsyntheticbiology
AT harrishwang genomescaleengineeringforsystemsandsyntheticbiology