Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
Multiple methods to infer cell-cell communication (CCC) from single cell data are currently available. Here, the authors systematically compare 16 CCC inference resources and 7 methods, and develop the LIANA framework as an interface to use and compare all these approaches.
Bibliographic Details
| Main Authors: |
Daniel Dimitrov,
Dénes Türei,
Martin Garrido-Rodriguez,
Paul L. Burmedi,
James S. Nagai,
Charlotte Boys,
Ricardo O. Ramirez Flores,
Hyojin Kim,
Bence Szalai,
Ivan G. Costa,
Alberto Valdeolivas,
Aurélien Dugourd,
Julio Saez-Rodriguez |
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| Format: | Article
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| Language: | English |
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| Published: |
Nature Portfolio
2022-06-01
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| Series: | Nature Communications
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| Online Access: | https://doi.org/10.1038/s41467-022-30755-0
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