Characterization of cooperative PS-oligo activation of human TLR9

Single-stranded phosphorothioate oligonucleotides (PS-oligos) can activate TLR9, leading to an innate immune response. This can occur with PS-oligos containing unmethylated CpG sites, the canonical motif, or PS-oligos that do not contain those motifs (non-CpG). Structural evidence shows that TLR9 co...

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Main Authors: Adam J. Pollak, Luyi Zhao, Stanley T. Crooke
Format: Article
Language:English
Published: Elsevier 2023-09-01
Series:Molecular Therapy: Nucleic Acids
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2162253123002202
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author Adam J. Pollak
Luyi Zhao
Stanley T. Crooke
author_facet Adam J. Pollak
Luyi Zhao
Stanley T. Crooke
author_sort Adam J. Pollak
collection DOAJ
description Single-stranded phosphorothioate oligonucleotides (PS-oligos) can activate TLR9, leading to an innate immune response. This can occur with PS-oligos containing unmethylated CpG sites, the canonical motif, or PS-oligos that do not contain those motifs (non-CpG). Structural evidence shows that TLR9 contains two PS-oligo binding sites, and recent data suggest that synergistic cooperative activation of TLR9 can be achieved by adding two separate PS-oligos to cells, each engaging with a separate site on TLR9 to enhance TLR9 activation as a pair. Here, we demonstrate and characterize this cooperativity phenomenon using PS-oligos in human cell lines, and we introduce several novel PS-oligo pairs (CpG and non-CpG pairs) that show cooperative activation. Indeed, we find that cooperative PS-oligos likely bind at different sites on TLR9. Interestingly, we find that PS-oligos that generate little TLR9 activation on their own can prime TLR9 to be activated by other PS-oligos. Finally, we determine that previous models of TLR9 activation cannot be used to fully explain data from systems using human TLR9 and PS-oligos. Overall, we reveal new details of TLR9 activation, but we also find that more work needs to be done to determine where certain PS-oligos are binding to TLR9.
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spelling doaj.art-4f3cba99e8d34c71ad01fbcae30d0bc02023-08-27T04:27:23ZengElsevierMolecular Therapy: Nucleic Acids2162-25312023-09-0133832844Characterization of cooperative PS-oligo activation of human TLR9Adam J. Pollak0Luyi Zhao1Stanley T. Crooke2Ionis Pharmaceuticals, Inc., Carlsbad, CA 92010, USA; Corresponding author: Adam J. Pollak, Department of Core Antisense Research, Ionis Pharmaceuticals, Inc., 2855 Gazelle Court, Carlsbad, CA 92010, USA.Ionis Pharmaceuticals, Inc., Carlsbad, CA 92010, USAIonis Pharmaceuticals, Inc., Carlsbad, CA 92010, USASingle-stranded phosphorothioate oligonucleotides (PS-oligos) can activate TLR9, leading to an innate immune response. This can occur with PS-oligos containing unmethylated CpG sites, the canonical motif, or PS-oligos that do not contain those motifs (non-CpG). Structural evidence shows that TLR9 contains two PS-oligo binding sites, and recent data suggest that synergistic cooperative activation of TLR9 can be achieved by adding two separate PS-oligos to cells, each engaging with a separate site on TLR9 to enhance TLR9 activation as a pair. Here, we demonstrate and characterize this cooperativity phenomenon using PS-oligos in human cell lines, and we introduce several novel PS-oligo pairs (CpG and non-CpG pairs) that show cooperative activation. Indeed, we find that cooperative PS-oligos likely bind at different sites on TLR9. Interestingly, we find that PS-oligos that generate little TLR9 activation on their own can prime TLR9 to be activated by other PS-oligos. Finally, we determine that previous models of TLR9 activation cannot be used to fully explain data from systems using human TLR9 and PS-oligos. Overall, we reveal new details of TLR9 activation, but we also find that more work needs to be done to determine where certain PS-oligos are binding to TLR9.http://www.sciencedirect.com/science/article/pii/S2162253123002202MT: Oligonucleotides: Therapies and ApplicationsTLR9PS-ASOCpGinnate immunityreceptor cooperativity
spellingShingle Adam J. Pollak
Luyi Zhao
Stanley T. Crooke
Characterization of cooperative PS-oligo activation of human TLR9
Molecular Therapy: Nucleic Acids
MT: Oligonucleotides: Therapies and Applications
TLR9
PS-ASO
CpG
innate immunity
receptor cooperativity
title Characterization of cooperative PS-oligo activation of human TLR9
title_full Characterization of cooperative PS-oligo activation of human TLR9
title_fullStr Characterization of cooperative PS-oligo activation of human TLR9
title_full_unstemmed Characterization of cooperative PS-oligo activation of human TLR9
title_short Characterization of cooperative PS-oligo activation of human TLR9
title_sort characterization of cooperative ps oligo activation of human tlr9
topic MT: Oligonucleotides: Therapies and Applications
TLR9
PS-ASO
CpG
innate immunity
receptor cooperativity
url http://www.sciencedirect.com/science/article/pii/S2162253123002202
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