Implementation of GA-VirReport, a Web-Based Bioinformatics Toolkit for Post-Entry Quarantine Screening of Virus and Viroids in Plants

Implementation of GA-VirReport, a Web-Based Bioinformatics Toolkit for Post-Entry Quarantine Screening of Virus and Viroids in Plants

High-throughput sequencing (HTS) of host plant small RNA (sRNA) is a popular approach for plant virus and viroid detection. The major bottlenecks for implementing this approach in routine virus screening of plants in quarantine include lack of computational resources and/or expertise in command-line...

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Bibliographic Details
Main Authors: Ruvini V. Lelwala, Zacharie LeBlanc, Marie-Emilie A. Gauthier, Candace E. Elliott, Fiona E. Constable, Greg Murphy, Callum Tyle, Adrian Dinsdale, Mark Whattam, Julie Pattemore, Roberto A. Barrero
Format: Article
Language:English
Published: MDPI AG 2022-07-01
Series:Viruses
Subjects:
high-throughput sequencing
small RNA
plant virus and viroid detection
post-entry quarantine
VirReport
Online Access:https://www.mdpi.com/1999-4915/14/7/1480

Internet

https://www.mdpi.com/1999-4915/14/7/1480

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