Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs

<p>Abstract</p> <p>Background</p> <p>Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly problem fall into two broad categories <b>- </b>based on th...

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Bibliographic Details
Main Authors: Vaughn Matthew, Dinh Hieu, Rajasekaran Sanguthevar, Kundeti Vamsi K, Thapar Vishal
Format: Article
Language:English
Published: BMC 2010-11-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/11/560