Direct Superbubble Detection

Superbubbles are a class of induced subgraphs in digraphs that play an essential role in assembly algorithms for high-throughput sequencing data. They are connected with the remainder of the host digraph by a single entrance and a single exit vertex. Linear-time algorithms for the enumeration superb...

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Bibliographic Details
Main Authors: Fabian Gärtner, Peter F. Stadler
Format: Article
Language:English
Published: MDPI AG 2019-04-01
Series:Algorithms
Subjects:
Online Access:https://www.mdpi.com/1999-4893/12/4/81