Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy

Cutaneous melanoma (CM) patients respond better to immune checkpoint inhibitors (ICI) than mucosal and uveal melanoma patients (MM/UM). Aiming to explore these differences and understand the distinct response to ICI, we evaluated the serum metabolome of advanced CM, MM, and UM patients. Levels of 11...

Full description

Bibliographic Details
Main Authors: Maysa Vilbert, Erica C. Koch, April A. N. Rose, Rob C. Laister, Diana Gray, Valentin Sotov, Susanne Penny, Anna Spreafico, Devanand M. Pinto, Marcus O. Butler, Samuel D. Saibil
Format: Article
Language:English
Published: MDPI AG 2023-07-01
Series:Cancers
Subjects:
Online Access:https://www.mdpi.com/2072-6694/15/14/3708
_version_ 1797589891188523008
author Maysa Vilbert
Erica C. Koch
April A. N. Rose
Rob C. Laister
Diana Gray
Valentin Sotov
Susanne Penny
Anna Spreafico
Devanand M. Pinto
Marcus O. Butler
Samuel D. Saibil
author_facet Maysa Vilbert
Erica C. Koch
April A. N. Rose
Rob C. Laister
Diana Gray
Valentin Sotov
Susanne Penny
Anna Spreafico
Devanand M. Pinto
Marcus O. Butler
Samuel D. Saibil
author_sort Maysa Vilbert
collection DOAJ
description Cutaneous melanoma (CM) patients respond better to immune checkpoint inhibitors (ICI) than mucosal and uveal melanoma patients (MM/UM). Aiming to explore these differences and understand the distinct response to ICI, we evaluated the serum metabolome of advanced CM, MM, and UM patients. Levels of 115 metabolites were analyzed in samples collected before ICI, using a targeted metabolomics platform. In our analysis, molecules involved in the tryptophan-kynurenine axis distinguished UM/MM from CM. UM/MM patients had higher levels of 3-hydroxykynurenine (3-HKyn), whilst patients with CM were found to have higher levels of kynurenic acid (KA). The KA/3-HKyn ratio was significantly higher in CM versus the other subtypes. UM, the most ICI-resistant subtype, was also associated with higher levels of sphingomyelin-d18:1/22:1 and the polyamine spermine (SPM). Overall survival was prolonged in a cohort of CM patients with lower SPM levels, suggesting there are also conserved metabolic factors promoting ICI resistance across melanoma subtypes. Our study revealed a distinct metabolomic profile between the most resistant melanoma subtypes, UM and MM, compared to CM. Alterations within the kynurenine pathway, polyamine metabolism, and sphingolipid metabolic pathway may contribute to the poor response to ICI. Understanding the different metabolomic profiles introduces opportunities for novel therapies with potential synergic activity to ICI, to improve responses of UM/MM.
first_indexed 2024-03-11T01:12:34Z
format Article
id doaj.art-5629b1e6c96b4cab9263690d11aec22a
institution Directory Open Access Journal
issn 2072-6694
language English
last_indexed 2024-03-11T01:12:34Z
publishDate 2023-07-01
publisher MDPI AG
record_format Article
series Cancers
spelling doaj.art-5629b1e6c96b4cab9263690d11aec22a2023-11-18T18:43:01ZengMDPI AGCancers2072-66942023-07-011514370810.3390/cancers15143708Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to ImmunotherapyMaysa Vilbert0Erica C. Koch1April A. N. Rose2Rob C. Laister3Diana Gray4Valentin Sotov5Susanne Penny6Anna Spreafico7Devanand M. Pinto8Marcus O. Butler9Samuel D. Saibil10Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaDepartment of Oncology, Jewish General Hospital, Lady Davis Institute, McGill University, Montréal, QC H3G 2M1, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaNational Research Council, Human Health Therapeutics, Halifax, NS B3H 3Y8, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaNational Research Council, Human Health Therapeutics, Halifax, NS B3H 3Y8, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaPrincess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 2M9, CanadaCutaneous melanoma (CM) patients respond better to immune checkpoint inhibitors (ICI) than mucosal and uveal melanoma patients (MM/UM). Aiming to explore these differences and understand the distinct response to ICI, we evaluated the serum metabolome of advanced CM, MM, and UM patients. Levels of 115 metabolites were analyzed in samples collected before ICI, using a targeted metabolomics platform. In our analysis, molecules involved in the tryptophan-kynurenine axis distinguished UM/MM from CM. UM/MM patients had higher levels of 3-hydroxykynurenine (3-HKyn), whilst patients with CM were found to have higher levels of kynurenic acid (KA). The KA/3-HKyn ratio was significantly higher in CM versus the other subtypes. UM, the most ICI-resistant subtype, was also associated with higher levels of sphingomyelin-d18:1/22:1 and the polyamine spermine (SPM). Overall survival was prolonged in a cohort of CM patients with lower SPM levels, suggesting there are also conserved metabolic factors promoting ICI resistance across melanoma subtypes. Our study revealed a distinct metabolomic profile between the most resistant melanoma subtypes, UM and MM, compared to CM. Alterations within the kynurenine pathway, polyamine metabolism, and sphingolipid metabolic pathway may contribute to the poor response to ICI. Understanding the different metabolomic profiles introduces opportunities for novel therapies with potential synergic activity to ICI, to improve responses of UM/MM.https://www.mdpi.com/2072-6694/15/14/3708melanomacutaneous melanomamucosal melanomauveal melanomaimmune-checkpoint inhibitorsmetabolomics
spellingShingle Maysa Vilbert
Erica C. Koch
April A. N. Rose
Rob C. Laister
Diana Gray
Valentin Sotov
Susanne Penny
Anna Spreafico
Devanand M. Pinto
Marcus O. Butler
Samuel D. Saibil
Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
Cancers
melanoma
cutaneous melanoma
mucosal melanoma
uveal melanoma
immune-checkpoint inhibitors
metabolomics
title Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
title_full Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
title_fullStr Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
title_full_unstemmed Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
title_short Analysis of the Circulating Metabolome of Patients with Cutaneous, Mucosal and Uveal Melanoma Reveals Distinct Metabolic Profiles with Implications for Response to Immunotherapy
title_sort analysis of the circulating metabolome of patients with cutaneous mucosal and uveal melanoma reveals distinct metabolic profiles with implications for response to immunotherapy
topic melanoma
cutaneous melanoma
mucosal melanoma
uveal melanoma
immune-checkpoint inhibitors
metabolomics
url https://www.mdpi.com/2072-6694/15/14/3708
work_keys_str_mv AT maysavilbert analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT ericackoch analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT aprilanrose analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT robclaister analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT dianagray analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT valentinsotov analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT susannepenny analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT annaspreafico analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT devanandmpinto analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT marcusobutler analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy
AT samueldsaibil analysisofthecirculatingmetabolomeofpatientswithcutaneousmucosalanduvealmelanomarevealsdistinctmetabolicprofileswithimplicationsforresponsetoimmunotherapy