The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation

Transposable elements (TEs) are self-replicating DNA elements that constitute major fractions of eukaryote genomes. Their ability to transpose can modify the genome structure with potentially deleterious effects. To repress TE activity, host cells have developed numerous strategies, including epigen...

Full description

Bibliographic Details
Main Authors: Melody Nicolau, Nathalie Picault, Guillaume Moissiard
Format: Article
Language:English
Published: MDPI AG 2021-10-01
Series:Cells
Subjects:
Online Access:https://www.mdpi.com/2073-4409/10/11/2952
_version_ 1797510859631624192
author Melody Nicolau
Nathalie Picault
Guillaume Moissiard
author_facet Melody Nicolau
Nathalie Picault
Guillaume Moissiard
author_sort Melody Nicolau
collection DOAJ
description Transposable elements (TEs) are self-replicating DNA elements that constitute major fractions of eukaryote genomes. Their ability to transpose can modify the genome structure with potentially deleterious effects. To repress TE activity, host cells have developed numerous strategies, including epigenetic pathways, such as DNA methylation or histone modifications. Although TE neo-insertions are mostly deleterious or neutral, they can become advantageous for the host under specific circumstances. The phenomenon leading to the appropriation of TE-derived sequences by the host is known as TE exaptation or co-option. TE exaptation can be of different natures, through the production of coding or non-coding DNA sequences with ultimately an adaptive benefit for the host. In this review, we first give new insights into the silencing pathways controlling TE activity. We then discuss a model to explain how, under specific environmental conditions, TEs are unleashed, leading to a TE burst and neo-insertions, with potential benefits for the host. Finally, we review our current knowledge of coding and non-coding TE exaptation by providing several examples in various organisms and describing a method to identify TE co-option events.
first_indexed 2024-03-10T05:37:18Z
format Article
id doaj.art-5708ce632ac14b0a9aada31beb428fc5
institution Directory Open Access Journal
issn 2073-4409
language English
last_indexed 2024-03-10T05:37:18Z
publishDate 2021-10-01
publisher MDPI AG
record_format Article
series Cells
spelling doaj.art-5708ce632ac14b0a9aada31beb428fc52023-11-22T22:49:10ZengMDPI AGCells2073-44092021-10-011011295210.3390/cells10112952The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic InnovationMelody Nicolau0Nathalie Picault1Guillaume Moissiard2LGDP-UMR5096, CNRS, 66860 Perpignan, FranceLGDP-UMR5096, CNRS, 66860 Perpignan, FranceLGDP-UMR5096, CNRS, 66860 Perpignan, FranceTransposable elements (TEs) are self-replicating DNA elements that constitute major fractions of eukaryote genomes. Their ability to transpose can modify the genome structure with potentially deleterious effects. To repress TE activity, host cells have developed numerous strategies, including epigenetic pathways, such as DNA methylation or histone modifications. Although TE neo-insertions are mostly deleterious or neutral, they can become advantageous for the host under specific circumstances. The phenomenon leading to the appropriation of TE-derived sequences by the host is known as TE exaptation or co-option. TE exaptation can be of different natures, through the production of coding or non-coding DNA sequences with ultimately an adaptive benefit for the host. In this review, we first give new insights into the silencing pathways controlling TE activity. We then discuss a model to explain how, under specific environmental conditions, TEs are unleashed, leading to a TE burst and neo-insertions, with potential benefits for the host. Finally, we review our current knowledge of coding and non-coding TE exaptation by providing several examples in various organisms and describing a method to identify TE co-option events.https://www.mdpi.com/2073-4409/10/11/2952transposable elementssilencingepigeneticsexaptation
spellingShingle Melody Nicolau
Nathalie Picault
Guillaume Moissiard
The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
Cells
transposable elements
silencing
epigenetics
exaptation
title The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
title_full The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
title_fullStr The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
title_full_unstemmed The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
title_short The Evolutionary Volte-Face of Transposable Elements: From Harmful Jumping Genes to Major Drivers of Genetic Innovation
title_sort evolutionary volte face of transposable elements from harmful jumping genes to major drivers of genetic innovation
topic transposable elements
silencing
epigenetics
exaptation
url https://www.mdpi.com/2073-4409/10/11/2952
work_keys_str_mv AT melodynicolau theevolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation
AT nathaliepicault theevolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation
AT guillaumemoissiard theevolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation
AT melodynicolau evolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation
AT nathaliepicault evolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation
AT guillaumemoissiard evolutionaryvoltefaceoftransposableelementsfromharmfuljumpinggenestomajordriversofgeneticinnovation