Fast structure similarity searches among protein models: efficient clustering of protein fragments

<p>Abstract</p> <p>Background</p> <p>For many predictive applications a large number of models is generated and later clustered in subsets based on structure similarity. In most clustering algorithms an all-vs-all root mean square deviation (RMSD) comparison is performe...

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Bibliographic Details
Main Authors: Fogolari Federico, Corazza Alessandra, Viglino Paolo, Esposito Gennaro
Format: Article
Language:English
Published: BMC 2012-05-01
Series:Algorithms for Molecular Biology
Online Access:http://www.almob.org/content/7/1/16