The PARA-suite: PAR-CLIP specific sequence read simulation and processing

The PARA-suite: PAR-CLIP specific sequence read simulation and processing

Background Next-generation sequencing technologies have profoundly impacted biology over recent years. Experimental protocols, such as photoactivatable ribonucleoside-enhanced cross-linking and immunoprecipitation (PAR-CLIP), which identifies protein–RNA interactions on a genome-wide scale, commonly...

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Bibliographic Details
Main Authors: Andreas Kloetgen, Arndt Borkhardt, Jessica I. Hoell, Alice C. McHardy
Format: Article
Language:English
Published: PeerJ Inc. 2016-10-01
Series:PeerJ
Subjects:
Next-generation sequencing
Read alignment
Cross-linking and immunoprecipitation (CLIP)
Read simulation
Posttranscriptional regulation
RNA-binding proteins
Online Access:https://peerj.com/articles/2619.pdf

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https://peerj.com/articles/2619.pdf

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