Experimental validation of in silico predicted RAD locus frequencies using genomic resources and short read data from a model marine mammal

Experimental validation of in silico predicted RAD locus frequencies using genomic resources and short read data from a model marine mammal

Abstract Background Restriction site-associated DNA sequencing (RADseq) has revolutionized the study of wild organisms by allowing cost-effective genotyping of thousands of loci. However, for species lacking reference genomes, it can be challenging to select the restriction enzyme that offers the be...

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Bibliographic Details
Main Authors: David L. J. Vendrami, Jaume Forcada, Joseph I. Hoffman
Format: Article
Language:English
Published: BMC 2019-01-01
Series:BMC Genomics
Subjects:
Restriction site associated DNA sequencing (RADseq)
Restriction enzyme
Reference genome
Transcriptome assembly
PredRAD
Antarctic fur seal
Online Access:http://link.springer.com/article/10.1186/s12864-019-5440-8

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http://link.springer.com/article/10.1186/s12864-019-5440-8

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