A Schema for Digitized Surface Swab Site Metadata in Open-Source DNA Sequence Databases

A Schema for Digitized Surface Swab Site Metadata in Open-Source DNA Sequence Databases

ABSTRACT Large, open-source DNA sequence databases have been generated, in part, through the collection of microbial pathogens by swabbing surfaces in built environments. Analyzing these data in aggregate through public health surveillance requires digitization of the complex, domain-specific metada...

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Bibliographic Details
Main Authors: Jingzhang Feng, Devin Daeschel, Damion Dooley, Emma Griffiths, Marc Allard, Ruth Timme, Yi Chen, Abigail B. Snyder
Format: Article
Language:English
Published: American Society for Microbiology 2023-04-01
Series:mSystems
Subjects:
genomic surveillance
epidemiology
informatics
foodborne pathogen
Online Access:https://journals.asm.org/doi/10.1128/msystems.01284-22

Internet

https://journals.asm.org/doi/10.1128/msystems.01284-22

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