HaplotypeCN: copy number haplotype inference with Hidden Markov Model and localized haplotype clustering.

Copy number variation (CNV) has been reported to be associated with disease and various cancers. Hence, identifying the accurate position and the type of CNV is currently a critical issue. There are many tools targeting on detecting CNV regions, constructing haplotype phases on CNV regions, or estim...

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Bibliographic Details
Main Authors: Yen-Jen Lin, Yu-Tin Chen, Shu-Ni Hsu, Chien-Hua Peng, Chuan-Yi Tang, Tzu-Chen Yen, Wen-Ping Hsieh
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2014-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4029584?pdf=render