DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models

DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models

Abstract Background RNAseq is nowadays the method of choice for transcriptome analysis. In the last decades, a high number of statistical methods, and associated bioinformatics tools, for RNAseq analysis were developed. More recently, statistical studies realised neutral comparison studies using ben...

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Bibliographic Details
Main Authors: Ilana Lambert, Christine Paysant-Le Roux, Stefano Colella, Marie-Laure Martin-Magniette
Format: Article
Language:English
Published: BMC 2020-05-01
Series:Plant Methods
Subjects:
RNA-seq
Analysis workspace
Differential expression
Contrasts
Co-expression
Online Access:http://link.springer.com/article/10.1186/s13007-020-00611-7

Internet

http://link.springer.com/article/10.1186/s13007-020-00611-7

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