Label-aware distance mitigates temporal and spatial variability for clustering and visualization of single-cell gene expression data
Abstract Clustering and visualization are essential parts of single-cell gene expression data analysis. The Euclidean distance used in most distance-based methods is not optimal. The batch effect, i.e., the variability among samples gathered from different times, tissues, and patients, introduces la...
Main Authors: | Shaoheng Liang, Jinzhuang Dou, Ramiz Iqbal, Ken Chen |
---|---|
Format: | Article |
Language: | English |
Published: |
Nature Portfolio
2024-03-01
|
Series: | Communications Biology |
Online Access: | https://doi.org/10.1038/s42003-024-05988-y |
Similar Items
-
SpatialLeiden: spatially aware Leiden clustering
by: Niklas Müller-Bötticher, et al.
Published: (2025-02-01) -
Learning Adaptive Spatial Regularization and Temporal-Aware Correlation Filters for Visual Object Tracking
by: Liqiang Liu, et al.
Published: (2022-11-01) -
Dual integration of multi‐model with spatial‐temporal occlusion‐awareness for visual object tracking
by: Fei Wang, et al.
Published: (2022-09-01) -
Music Personalized Label Clustering and Recommendation Visualization
by: Yongkang Huo
Published: (2021-01-01) -
Spatial distances affect temporal prediction and interception
by: Anna Schroeger, et al.
Published: (2022-09-01)