Igneous: Distributed dense 3D segmentation meshing, neuron skeletonization, and hierarchical downsampling

Igneous: Distributed dense 3D segmentation meshing, neuron skeletonization, and hierarchical downsampling

Three-dimensional electron microscopy images of brain tissue and their dense segmentations are now petascale and growing. These volumes require the mass production of dense segmentation-derived neuron skeletons, multi-resolution meshes, image hierarchies (for both modalities) for visualization and a...

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Bibliographic Details
Main Authors: William Silversmith, Aleksandar Zlateski, J. Alexander Bae, Ignacio Tartavull, Nico Kemnitz, Jingpeng Wu, H. Sebastian Seung
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-11-01
Series:Frontiers in Neural Circuits
Subjects:
meshing
skeletonization
neuroscience
connectomics
image processing
cloud computing
Online Access:https://www.frontiersin.org/articles/10.3389/fncir.2022.977700/full

Internet

https://www.frontiersin.org/articles/10.3389/fncir.2022.977700/full

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