HMD-ARG: hierarchical multi-task deep learning for annotating antibiotic resistance genes

HMD-ARG: hierarchical multi-task deep learning for annotating antibiotic resistance genes

Abstract Background The spread of antibiotic resistance has become one of the most urgent threats to global health, which is estimated to cause 700,000 deaths each year globally. Its surrogates, antibiotic resistance genes (ARGs), are highly transmittable between food, water, animal, and human to mi...

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Bibliographic Details
Main Authors: Yu Li, Zeling Xu, Wenkai Han, Huiluo Cao, Ramzan Umarov, Aixin Yan, Ming Fan, Huan Chen, Carlos M. Duarte, Lihua Li, Pak-Leung Ho, Xin Gao
Format: Article
Language:English
Published: BMC 2021-02-01
Series:Microbiome
Subjects:
Antibiotic resistance genes
Deep learning
Antibiotic class
Resistant mechanism
Gene mobility
Multi-task learning
Online Access:https://doi.org/10.1186/s40168-021-01002-3

Internet

https://doi.org/10.1186/s40168-021-01002-3

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