PepQuery2 democratizes public MS proteomics data for rapid peptide searching

Abstract We present PepQuery2, which leverages a new tandem mass spectrometry (MS/MS) data indexing approach to enable ultrafast, targeted identification of novel and known peptides in any local or publicly available MS proteomics datasets. The stand-alone version of PepQuery2 allows directly search...

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Bibliographic Details
Main Authors: Bo Wen, Bing Zhang
Format: Article
Language:English
Published: Nature Portfolio 2023-04-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-37462-4