The META tool optimizes metagenomic analyses across sequencing platforms and classifiers

The META tool optimizes metagenomic analyses across sequencing platforms and classifiers

A major challenge in the field of metagenomics is the selection of the correct combination of sequencing platform and downstream metagenomic analysis algorithm, or “classifier”. Here, we present the Metagenomic Evaluation Tool Analyzer (META), which produces simulated data and facilitates platform a...

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Bibliographic Details
Main Authors: Robert A. Player, Angeline M. Aguinaldo, Brian B. Merritt, Lisa N. Maszkiewicz, Oluwaferanmi E. Adeyemo, Ellen R. Forsyth, Kathleen J. Verratti, Brant W. Chee, Sarah L. Grady, Christopher E. Bradburne
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-01-01
Series:Frontiers in Bioinformatics
Subjects:
metagenomics
metagenomic classification
testing and evaluation
NGS
oxford nanopore
illumina
Online Access:https://www.frontiersin.org/articles/10.3389/fbinf.2022.969247/full

Internet

https://www.frontiersin.org/articles/10.3389/fbinf.2022.969247/full

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