Nanopore sequencing reveals genomic map of CTX-M-type extended-spectrum β-lactamases carried by Escherichia coli strains isolated from blue mussels (Mytilus edulis) in Norway

Nanopore sequencing reveals genomic map of CTX-M-type extended-spectrum β-lactamases carried by Escherichia coli strains isolated from blue mussels (Mytilus edulis) in Norway

Abstract Background Environmental surveillance of antibiotic resistance can contribute towards better understanding and management of human and environmental health. This study applied a combination of long-read Oxford Nanopore MinION and short-read Illumina MiSeq-based sequencing to obtain closed c...

Full description

Bibliographic Details
Main Authors: Didrik H. Grevskott, Francisco Salvà-Serra, Edward R. B. Moore, Nachiket P. Marathe
Format: Article
Language:English
Published: BMC 2020-05-01
Series:BMC Microbiology
Subjects:
Norway
Escherichia coli
ESBL
Nanopore
Genome sequence
MinION
Online Access:http://link.springer.com/article/10.1186/s12866-020-01821-8

Internet

http://link.springer.com/article/10.1186/s12866-020-01821-8

Similar Items