Scalable and versatile container-based pipelines for de novo genome assembly and bacterial annotation. [version 1; peer review: 2 approved, 1 approved with reservations]

Background: Advancements in DNA sequencing technology have transformed the field of bacterial genomics, allowing for faster and more cost effective chromosome level assemblies compared to a decade ago. However, transforming raw reads into a complete genome model is a significant computational challe...

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Bibliographic Details
Main Authors: Tatiana Amabile de Campos, Georgios Joannis Pappas Jr, Felipe Marques de Almeida
Format: Article
Language:English
Published: F1000 Research Ltd 2023-09-01
Series:F1000Research
Subjects:
Online Access:https://f1000research.com/articles/12-1205/v1