Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences

Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences

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The high sequence divergence within the small subunit ribosomal RNA gene (SSU rDNA) of foraminifera makes it difficult to establish the homology of individual nucleotides across taxa. Alignment-based approaches so far relied on time-consuming manual alignments and discarded up to 50% of the sequence...

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Bibliographic Details
Main Authors: Ralf Aurahs, Markus Göker, Guido W. Grimm, Vera Hemleben, Christoph Hemleben, Ralf Schiebel, Michal Kučera
Format: Article
Language:English
Published: SAGE Publishing 2009-11-01
Series:Bioinformatics and Biology Insights
Online Access:http://la-press.com/using-the-multiple-analysis-approach-to-reconstruct-phylogenetic-relat-a1734

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http://la-press.com/using-the-multiple-analysis-approach-to-reconstruct-phylogenetic-relat-a1734

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