A Practical Bioinformatics Workflow for Routine Analysis of Bacterial WGS Data

A Practical Bioinformatics Workflow for Routine Analysis of Bacterial WGS Data

The use of whole-genome sequencing (WGS) for bacterial characterisation has increased substantially in the last decade. Its high throughput and decreasing cost have led to significant changes in outbreak investigations and surveillance of a wide variety of microbial pathogens. Despite the innumerabl...

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Bibliographic Details
Main Authors: Aitor Atxaerandio-Landa, Ainhoa Arrieta-Gisasola, Lorena Laorden, Joseba Bikandi, Javier Garaizar, Irati Martinez-Malaxetxebarria, Ilargi Martinez-Ballesteros
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:Microorganisms
Subjects:
foodborne pathogens
whole-genome sequencing
bioinformatics workflow
Galaxy
Online Access:https://www.mdpi.com/2076-2607/10/12/2364

Internet

https://www.mdpi.com/2076-2607/10/12/2364

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