pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive [version 1; peer review: 2 approved]

The NCBI Sequence Read Archive (SRA) is the primary archive of next-generation sequencing datasets. SRA makes metadata and raw sequencing data available to the research community to encourage reproducibility and to provide avenues for testing novel hypotheses on publicly available data. However, met...

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Bibliographic Details
Main Author: Saket Choudhary
Format: Article
Language:English
Published: F1000 Research Ltd 2019-04-01
Series:F1000Research
Online Access:https://f1000research.com/articles/8-532/v1