Novel Organism Verification and Analysis (NOVA) study: identification of 35 clinical isolates representing potentially novel bacterial taxa using a pipeline based on whole genome sequencing

Novel Organism Verification and Analysis (NOVA) study: identification of 35 clinical isolates representing potentially novel bacterial taxa using a pipeline based on whole genome sequencing

Abstract Background Reliable species identification of cultured isolates is essential in clinical bacteriology. We established a new study algorithm named NOVA – Novel Organism Verification and Analysis to systematically analyze bacterial isolates that cannot be characterized by conventional identif...

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Bibliographic Details
Main Authors: Veronika Muigg, Helena M.B. Seth-Smith, Kai-Manuel Adam, Maja Weisser, Vladimira Hinić, Annette Blaich, Tim Roloff, Ulrich Heininger, Hanna Schmid, Maurus Kohler, Lukas Graf, Dylan M. Winterflood, Pascal Schlaepfer, Daniel Goldenberger
Format: Article
Language:English
Published: BMC 2024-01-01
Series:BMC Microbiology
Subjects:
Clinical isolates
Difficult to identify strains
Whole genome sequencing (WGS)
Novel bacteria
Clinical significance
Type (strain) genome server (TYGS)
Online Access:https://doi.org/10.1186/s12866-023-03163-7

Internet

https://doi.org/10.1186/s12866-023-03163-7

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