N-Grams Modeling for Protein Secondary Structure Prediction: Exploring Local Features and Optimal CNN Parameters

This study explores the potential of n-gram modeling in protein secondary structure prediction. Experiments are conducted on three datasets using bigrams, trigrams, and a combination of the best n-grams with PSSM profiles. Optimal parameters for Convolutional Neural Networks (CNNs) are investigated....

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Bibliographic Details
Main Authors: Rizqiana Annisa, Afiahayati
Format: Article
Language:English
Published: EDP Sciences 2023-01-01
Series:BIO Web of Conferences
Subjects:
Online Access:https://www.bio-conferences.org/articles/bioconf/pdf/2023/20/bioconf_biomic2023_01008.pdf